Proteomics Informatics Course

The Seattle Proteome Center (SPC) at ISB offers four and five-day intensive courses in the use of our suite of open-source software tools designed for the analysis, validation, storage and interpretation of data obtained from large-scale quantitative proteomics experiments and methods, multi-dimensional chromatography and tandem mass spectrometry. Through daily lectures and tutorials, each course participant should become proficient in the use of these tools, which comprise the Trans-Proteomic Pipeline (TPP). More information on the TPP, including software downloads can be found on the TPP Wiki page.

The Course also includes instruction on using SPC resources such as CORRA, PeptideAtlas, SRMAtlas, and related tools for design of targeted proteomics workflows via selected reaction monitoring (SRM/MRM) such as TIQAM, and other software packages.

The next offered course will be:

June 4-8, 2012 at the Institute for Systems Biology in Seattle, Washington
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Evening workshop on TPP and related Open-Source Tools, on Wednesday, May 23rd, during the ASMS Annual Conference in Vancouver. More info can be found here.

Information on past Proteomics Informatics Courses may be found on their respective pages below:

July 11 - July 15, 2011 at the Institute for Systems Biology in Seattle, Washington.

August 29-September 2, 2011 in Geneva, Switzerland

October 25 - October 29, 2010 at the Institute for Systems Biology in Seattle, Washington.

September 14 - September 17, 2010 at the University of New South Wales campus in Australia.

April 27 - May 1, 2009 at the Institute for Systems Biology in Seattle, Washington.